[Research]

[Group]

[PI]

[Publications]

[News]

[NCSU Chemistry]

Lindsey Lab publications

Some articles are available on PubMed; others are available on request.

[Journal articles]    [Book chapters]    [Popular articles]    [Technical reports]    [Extended abstracts]

Peer-reviewed journal articles

1.       “Increased Yield of a Desired Isomer by Equilibria Displacement on Binding to Silica Gel, Applied to meso-Tetrakis(o-aminophenyl)Porphyrin,” Lindsey, J. S. J. Org. Chem. 1980, 45, 5215.

2.       “Synthesis of a Cofacial Porphyrin-Quinone via Entropically Favored Macropolycyclization,” Lindsey, J. S.; Mauzerall, D. C. J. Am. Chem. Soc. 1982, 104, 4498–4500.

3.       “Excited State Porphyrin-Quinone Interactions at 10 Å Separation,” Lindsey, J. S.; Mauzerall, D. C.; Linschitz, H. J. Am. Chem. Soc. 1983, 105, 6528–6529.

4.       “A Theoretical Investigation of the One-Photon and Two-Photon Properties of Porphyrins,” Masthay, M. B.; Findsen, L. A.; Pierce, B. M.; Bocian, D. F.; Lindsey, J. S.; Birge, R. R. J. Chem. Phys. 1986, 84, 3901–3915.

5.       “Coenzyme Models 40. Spectral and Reactivity Studies of Roseoflavin Analogues: Correlation between Reactivity and Spectral Parameters,” Shinkai, S.; Kameoka, K.; Honda, N.; Ueda, K.; Manabe, O.; Lindsey, J. Bioorg. Chem. 1986, 14, 119–133.

6.       “Synthesis of Tetraphenylporphyrins Under Very Mild Conditions,” Lindsey, J. S.; Hsu, H. C.; Schreiman, I. C. Tetrahedron Lett. 1986, 27, 4969–4970.

7.       “Rothemund and Adler-Longo Reactions Revisited: Synthesis of Tetraphenylporphyrins Under Equilibrium Conditions,” Lindsey, J. S.; Schreiman, I. C.; Hsu, H. C.; Kearney, P. C.; Marguerettaz, A. M. J. Org. Chem. 1987, 52, 827–836.

8.       “An Improved Synthesis of Tetramesitylporphyrin,” Wagner, R. W.; Lawrence, D. S.; Lindsey, J. S. Tetrahedron Lett. 1987, 28, 3069–3070.

9.       “Spin Density Distributions in meso-Alkyl/Aryl Hybrid Porphyrin Cation Radicals,” Atamian, M.; Wagner, R. W.; Lindsey, J. S.; Bocian, D. F. Inorg. Chem. 1988, 27, 1510–1512.

10.     “Solution Conformation of a Porphyrin-Quinone Cage Molecule Determined by Dipolar Magnetic Field Effects in Ultra-High Field NMR,” Lisicki, M. A.; Mishra, P. K.; Bothner-By, A. A.; Lindsey, J. S. J. Phys. Chem. 1988, 92, 3400–3403.

11.     “Photophysics of a Cofacial Zinc Porphyrin-Quinone Cage Molecule and Related Compounds: Fluorescence Properties, Flash Transients, and Electron-Transfer Reactions,” Lindsey, J. S.; Delaney, J. K.; Mauzerall, D. C.; Linschitz, H. J. Am. Chem. Soc. 1988, 110, 3610–3621.

12.     “Robotic Workstation for Microscale Synthetic Chemistry: On-Line Absorption Spectroscopy, Quantitative Automated Thin Layer Chromatography, and Multiple Reactions in Parallel,” Lindsey, J. S.; Corkan, L. A.; Erb, D.; Powers, G. J. Rev. Sci. Instrum. 1988, 59, 940–950.

13.     “Molecular Recognition: Multipoint Contacts With New Sizes and Shapes,” Lindsey, J. S.; Kearney, P. C.; Duff, R. J.; Tjivikua, P. T.; Rebek, J. J. Am. Chem. Soc. 1988, 110, 6575–6577.

14.     “Investigation of the Synthesis of Ortho-Substituted Tetraphenylporphyrins,” Lindsey, J. S.; Wagner, R. W. J. Org. Chem. 1989, 54, 828–836.

15.     “Resonance Raman Spectra and Normal Coordinate Analysis of Reduced Porphyrins. I. Zinc(II) Tetraphenylporphyrin Anion,” Atamian, M.; Donohoe, R. J.; Lindsey, J. S.; Bocian, D. F. J. Phys. Chem. 1989, 93, 2236–2243.

16.     “Hindered Diffusion of Short-Chain Polystyrene and Porphyrins in Small Pores,” Kathawalla, I. A.; Anderson, J. L.; Lindsey, J. S. Macromolecules 1989, 22, 1215–1219.

17.     “Spectroscopic Characterization of Porphyrin Monolayer Assemblies,” Schick, G. A.; Schreiman, I. C.; Wagner, R. W.; Lindsey, J. S.; Bocian, D. F. J. Am. Chem. Soc. 1989, 111, 1344–1350.

18.     “Visible Light Harvesting in Covalently-Linked Porphyrin-Cyanine Dyes,” Lindsey, J. S.; Brown, P. A.; Siesel, D. A. Tetrahedron 1989, 45, 4845–4866.

19.     “Electron Tunneling in a Cofacial Zinc Porphyrin-Quinone Cage Molecule: Novel Temperature and Solvent Dependence,” Delaney, J. K.; Mauzerall, D. C.; Lindsey, J. S. J. Am. Chem. Soc. 1990, 112, 957–963.

20.     “Self-Assembly in Synthetic Routes to Molecular Devices. Biological Principles and Chemical Perspectives: A Review,” Lindsey, J. S. New J. Chem. 1991, 15, 153–180.

21.     “Synthesis of Facially-Encumbered Porphyrins. An Approach to Light-Harvesting Antenna Complexes,” Wagner, R. W.; Breakwell, B. V.; Ruffing, J.; Lindsey, J. S. Tetrahedron Lett. 1991, 32, 1703–1706.

22.     “Self-Assembly of Molecular Devices containing a Ferrocene, a Porphyrin, and a Quinone in a Triple Macrocyclic Architecture,” Wagner, R. W.; Brown, P. A.; Johnson, T. E.; Lindsey, J. S. J. Chem. Soc., Chem. Commun. 1991, 1463–1466.

23.     “252Cf Plasma Desorption Mass Spectrometry in the Synthesis of Porphyrin Model Systems,” Lindsey, J. S.; Chaudhary, T.; Chait, B. T. Anal. Chem. 1992, 64, 2804–2814.

24.     “A Retrospective on the Automation of Laboratory Synthetic Chemistry,” Lindsey, J. S. Chemom. Intell. Lab. Syst.: Lab. Inf. Mgt. 1992, 17, 15-45.

25.     “Experiment Manager Software for an Automated Chemistry Workstation, including a Scheduler for Parallel Experimentation,” Corkan, L. A.; Lindsey, J. S. Chemom. Intell. Lab. Syst.: Lab. Inf. Mgt. 1992, 17, 47–74.

26.     “Experiment Planner for Strategic Experimentation with an Automated Chemistry Workstation,” Plouvier, J.-C.; Corkan, L. A.; Lindsey, J. S. Chemom. Intell. Lab. Syst.: Lab. Inf. Mgt. 1992, 17, 75–94.

27.     “Application of an Automated Chemistry Workstation to Problems in Synthetic Chemistry,” Corkan, L. A.; Plouvier, J.-C.; Lindsey, J. S. Chemom. Intell. Lab. Syst.: Lab. Inf. Mgt. 1992, 17, 95–105.

28.     “Toward High-Performance Parallel Experimentation Machines. Use of a Scheduler as a Quantitative Computer-Aided Design Tool for Evaluating Workstation Performance,” J. S. Lindsey and L. A. Corkan, Chemom. Intell. Lab. Syst.: Lab. Inf. Mgt. 1993, 21, 139–150.

29.     “Building-Block Synthesis of Porphyrin Light-Harvesting Arrays,” Prathapan, S.; Johnson, T. E.; Lindsey, J. S. J. Am. Chem. Soc. 1993, 115, 7519–7520.

30.     “Sequential Protonation of meso-(p-(Dimethylamino)phenyl)porphyrins: Charge-Transfer Excited States Producing Hyperporphyrins,” Ojadi, E. C. A.; Linschitz, H.; Gouterman, M.; Walters, R. I.; Lindsey, J. S.; Wagner, R. W.; Droupadi, P. R.; Wang, W. J. Phys. Chem. 1993, 97, 13192–13197.

31.     “Investigation of a Synthesis of meso-Porphyrins Employing High Concentration Conditions and an Electron Transport Chain for Aerobic Oxidation,” Lindsey, J. S.; MacCrum, K. A.; Tyhonas, J. S.; Chuang, Y.-Y. J. Org. Chem. 1994, 59, 579–587.

32.     “Synthesis of Amphipathic Porphyrins and Their Photoinduced Electron Transfer Reactions at the Lipid Bilayer-Water Interface,” Hwang, K. C.; Mauzerall, D.; Wagner, R. W.; Lindsey, J. S. Photochem. Photobiol. 1994, 59, 145–151.

33.     “Porphyrin Building Blocks for Modular Construction of Bioorganic Model Systems,” Lindsey, J. S.; Prathapan, S.; Johnson, T. E.; Wagner, R. W. Tetrahedron 1994, 50, 8941–8968.

34.     “Synthesis of Porphyrins Tailored with Eight Facially-encumbering Groups. An Approach to Solid-State Light-Harvesting Complexes,” Wagner, R. W.; Lindsey, J. S.; Turowska-Tyrk, I.; Scheidt, W. R. Tetrahedron 1994, 50, 11097–11112.

35.     “One-Flask Synthesis of Meso-substituted Dipyrromethanes and Their Application in the Synthesis of Trans-Substituted Porphyrin Building Blocks,” Lee, C.-H.; Lindsey, J. S. Tetrahedron 1994, 50, 11427–11440.

36.     “Investigation of Electronic Communication in Multi-Porphyrin Light-Harvesting Arrays,” Seth, J.; Palaniappan, V.; Johnson, T. E.; Prathapan, S.; Lindsey, J. S.; Bocian, D. F. J. Am. Chem. Soc. 1994, 116, 10578–10592.

37.     “A Molecular Photonic Wire,” Wagner, R. W.; Lindsey, J. S. J. Am. Chem. Soc. 1994, 116, 9759–9760.

38.     “Flexible Protocols Improve Parallel Experimentation Throughput,” Aarts, R. J.; Lindsey, J. S.; Corkan, L. A.; Smith, S. F. Clin. Chem. 1995, 41, 1004–1010.

39.     “A Simple Method for Preparing Magnesium Porphyrins,” Lindsey, J. S.; Woodford, J. N. Inorg. Chem. 1995, 34, 1063–1069.

40.     “Synthetic Approaches to Regioisomerically Pure Porphyrins Bearing Four Different Meso-Substituents,” Lee, C.-H.; Li, F.; Iwamoto, K.; Dadok, J.; Bothner-By, A. A.; Lindsey, J. S. Tetrahedron 1995, 51, 11645–11672.

41.     “Synthesis of Ethyne-Linked or Butadiyne-Linked Porphyrin Arrays Using Mild, Copper-Free, Pd-Mediated Coupling Reactions,” Wagner, R. W.; Johnson, T. E.; Li, F.; Lindsey, J. S. J. Org. Chem. 1995, 60, 5266–5273.

42.     “Boron-Dipyrromethene Dyes For Incorporation In Synthetic Multi-Pigment Light-Harvesting Arrays,” Wagner, R. W.; Lindsey, J. S. Pure Appl. Chem. 1996, 68, 1373–1380.  Corrigendum:  Wagner, R. W.; Lindsey, J. S. Pure Appl. Chem. 1998, 70 (8), p. i.

43.     “Molecular Optoelectronic Gates,” Wagner, R. W.; Lindsey, J. S.; Seth, J.; Palaniappan, V.; Bocian, D. F. J. Am. Chem. Soc. 1996, 118, 3996–3997.

44.     “Molecular Dynamics of Covalently-Linked Multi-porphyrin Arrays,” Bothner-By, A. A.; Dadok, J.; Johnson, T. E.; Lindsey, J. S. J. Phys. Chem. 1996, 100, 17551–17557.

45.     “Soluble Synthetic Multiporphyrin Arrays. 1. Modular Design and Synthesis,” Wagner, R. W.; Johnson, T. E.; Lindsey, J. S. J. Am. Chem. Soc. 1996, 118, 11166–11180.

46.     “Soluble Synthetic Multiporphyrin Arrays. 2. Photodynamics of Energy-Transfer Processes,” Hsiao, J.-S.; Krueger, B. P.; Wagner, R. W.; Johnson, T. E.; Delaney, J. K.; Mauzerall, D. C.; Fleming, G. R.; Lindsey, J. S.; Bocian, D. F.; Donohoe, R. J. J. Am. Chem. Soc. 1996, 118, 11181–11193.

47.     “Soluble Synthetic Multiporphyrin Arrays. 3. Static Spectroscopic and Electrochemical Probes of Electronic Communication,” Seth, J.; Palaniappan, V.; Wagner, R. W.; Johnson, T. E.; Lindsey, J. S.; Bocian, D. F. J. Am. Chem. Soc. 1996, 118, 11194–11207.

48.     “Synthesis of Linear Amphipathic Porphyrin Dimers and Trimers: An Approach to Bilayer Lipid Membrane Spanning Porphyrin Arrays,” Nishino, N.; Wagner, R. W.; Lindsey, J. S. J. Org. Chem. 1996, 61, 7534–7544.

49.     “An Investigation of the Scope of Heterogeneous and Homogeneous Procedures for Preparing Magnesium Chelates of Porphyrins, Hydroporphyrins, and Phthalocyanines,” O’Shea, D. F.; Miller, M. A.; Matsueda, H.; Lindsey, J. S. Inorg. Chem. 1996, 35, 7325–7338.

50.     “Laser Desorption Mass Spectrometry of Synthetic Multi-Porphyrin Arrays,” Fenyo, D.; Chait, B. T.; Johnson, T. E.; Lindsey, J. S. J. Porphyrins Phthalocyanines 1997, 1, 93–99.

51.     “Effects of Central Metal Ion (Mg, Zn) and Solvent on Singlet Excited-State Energy Flow in Porphyrin-Based Nanostructures,” Li, F.; Gentemann, S.; Kalsbeck, W. A.; Seth, J.; Lindsey, J. S.; Holten, D.; Bocian, D. F. J. Mater. Chem. 1997, 7, 1245–1262.

52.     “Investigation of the One-Flask Synthesis of Porphyrins Bearing Meso-linked Straps of Variable Length, Rigidity, and Redox Activity,” Wagner, R. W.; Johnson, T. E.; Lindsey, J. S. Tetrahedron 1997, 53, 6755–6790.

53.     “Investigation of Phthalocyanine Catalysts for the Aerobic Synthesis of meso-Substituted Porphyrins,” Ravikanth, M.; Achim, C.; Tyhonas, J. S.; Münck, E.; Lindsey, J. S. J. Porphyrins Phthalocyanines 1997, 1, 385–394.

54.     “Beneficial Effects of Salts on an Acid-Catalyzed Condensation Leading to Porphyrin Formation,” Li, F.; Yang, K.; Tyhonas, J. S.; MacCrum, K. A.; Lindsey, J. S. Tetrahedron 1997, 53, 12339–12360.

55.     “Effects of Orbital Ordering on Electronic Communication in Multiporphyrin Arrays,” Strachan, J.-P.; Gentemann, S.; Seth, J.; Kalsbeck, W. A.; Lindsey, J. S.; Holten, D.; Bocian, D. F. J. Am. Chem. Soc. 1997, 119, 11191–11201.

56.     “Energy-Transfer Modeling for the Rational Design of Multiporphyrin Light-Harvesting Arrays,” Van Patten, P. G.; Shreve, A. P.; Lindsey, J. S.; Donohoe, R. J. J. Phys. Chem. B 1998, 102, 4209–4216.

57.     “Synthesis and Characterization of Tetrachlorodiarylethyne-Linked Porphyrin Dimers. Effects of Linker Architecture on Intradimer Electronic Communication,” Strachan, J.-P.; Gentemann, S.; Seth, J.; Kalsbeck, W. A.; Lindsey, J. S.; Holten, D.; Bocian, D. F. Inorg. Chem. 1998, 37, 1191–1201.

58.     “PhotochemCAD. A Computer-Aided Design and Research Tool in Photochemistry and Photobiology,” Du, H.; Fuh, R.-C. A.; Li, J.; Corkan, L. A.; Lindsey, J. S. Photochem. Photobiol. 1998, 68, 141–142.

59.     “Analysis of Sugar Phosphates and Related Compounds using Capillary Zone Electrophoresis with Indirect UV-Detection,” Ciringh, Y.; Lindsey, J. S. J. Chromatogr. A, 1998, 816, 251–259.

60.     “Synthesis and Excited-State Photodynamics of a Molecular Square Containing Four Mutually Coplanar Porphyrins,” Wagner, R. W.; Seth, J.; Yang, S. I.; Kim, D.; Bocian, D. F.; Holten, D.; Lindsey, J. S. J. Org. Chem. 1998, 63, 5042–5049.

61.     “Trans-Substituted Porphyrin Building Blocks Bearing Iodo and Ethynyl Groups for Applications in Bioorganic and Materials Chemistry,” Ravikanth, M.; Strachan, J.-P.; Li, F.; Lindsey, J. S. Tetrahedron 1998, 54, 7721–7734.

62.     “Design, Synthesis, and Photodynamics of Light-Harvesting Arrays Comprised of a Porphyrin and One, Two or Eight Boron-Dipyrrin Accessory Pigments,” Li, F.; Yang, S. I.; Ciringh, Y.; Seth, J.; Martin III, C. H.; Singh, D. L.; Kim, D.; Birge, R. R.; Bocian, D. F.; Holten, D.; Lindsey, J. S. J. Am. Chem. Soc. 1998, 120, 10001–10017.

63.     “Investigation of Cocatalysis Conditions using an Automated Microscale Multireactor Workstation: Synthesis of meso-Tetramesitylporphyrin,” Wagner, R. W.; Li, F.; Du, H.; Lindsey, J. S. Org. Process Res. Dev. 1999, 3, 28–37.

64.     “Excited-State Energy Transfer and Ground-State Hole/Electron Hopping in p-Phenylene-Linked Porphyrin Dimers,” Yang, S. I.; Lammi, R. K.; Seth, J.; Riggs, J. A.; Arai, T.; Kim, D.; Bocian, D. F.; Holten, D.; Lindsey, J. S. J. Phys. Chem. B 1998, 102, 9426–9436.

65.     “Refined Synthesis of 5-Substituted Dipyrromethanes,” Littler, B. J.; Miller, M. A.; Hung, C.-H.; Wagner, R. W.; O’Shea, D. F.; Boyle, P. D.; Lindsey, J. S. J. Org. Chem. 1999, 64, 1391–1396.

66.     “N-Confused Tetraphenylporphyrin and Tetraphenylsapphyrin Formation in One-Flask Syntheses of Tetraphenylporphyrin,” Geier, G. R., III; Lindsey, J. S. J. Org. Chem. 1999, 64, 1596–1603.

67.     “Ground and Excited State Electronic Properties of Halogenated Tetraarylporphyrins. Tuning the Building Blocks for Porphyrin-based Photonic Devices,” Yang, S. I.; Seth, J.; Strachan, J.-P.; Gentemann, S.; Kim, D.; Holten, D.; Lindsey, J. S.; Bocian, D. F. J. Porphyrins Phthalocyanines 1999, 3, 117–147.

68.     “Investigation of Conditions Giving Minimal Scrambling in the Synthesis of Trans-Porphyrins from Dipyrromethanes and Aldehydes,” Littler, B. J.; Ciringh, Y.; Lindsey, J. S. J. Org. Chem. 1999, 64, 2864–2872.

69.     “Interplay of Orbital Tuning and Linker Location in Controlling Electronic Communication in Porphyrin Arrays,” Yang, S. I.; Seth, J.; Balasubramanian, T.; Kim, D.; Lindsey, J. S.; Holten, D.; Bocian, D. F. J. Am. Chem. Soc. 1999, 121, 4008–4018.

70.     “Investigation of MALDI-TOF Mass Spectrometry of Diverse Synthetic Metalloporphyrins, Phthalocyanines, and Multiporphyrin Arrays,” Srinivasan, N.; Haney, C. A.; Lindsey, J. S.; Zhang, W.; Chait, B. T. J. Porphyrins Phthalocyanines 1999, 3, 283–291.

71.     “An Automated Microscale Chemistry Workstation Capable of Parallel, Adaptive Experimentation,” Du, H.; Corkan, L. A.; Yang, K.; Kuo, P. Y.; Lindsey, J. S. Chemom. Intell. Lab. Syst. 1999, 48, 181–203.

72.     “Decision-Tree Programs for an Adaptive Automated Chemistry Workstation: Application to Catalyst Screening Experiments,” Du, H.; Shen, W.; Kuo, P. Y.; Lindsey, J. S. Chemom. Intell. Lab. Syst. 1999, 48, 205–217.

73.     “A Planning Module for Performing Grid Search, Factorial Design, and Related Combinatorial Studies on an Automated Chemistry Workstation,” Kuo, P. Y.; Du, H.; Corkan, L. A.; Yang, K.; Lindsey, J. S. Chemom. Intell. Lab. Syst. 1999, 48, 219–234.

74.     “Implementation of the Multidirectional Search Algorithm on an Automated Chemistry Workstation. A Parallel Yet Adaptive Approach for Reaction Optimization,” Du, H.; Jindal, S.; Lindsey, J. S. Chemom. Intell. Lab. Syst. 1999, 48, 235–256.

75.     “Further Development of a Versatile Microscale Automated Workstation for Parallel Adaptive Experimentation,” Cork, D. G.; Sugawara, T.; Lindsey, J. S.; Corkan, L. A.; Du, H. Lab. Robot. Autom. 1999, 11, 217–223.

76.     “Synthesis of b-Substituted Porphyrin Building Blocks and Conversion to Diphenylethyne-Linked Porphyrin Dimers,” Balasubramanian, T.; Lindsey, J. S. Tetrahedron 1999, 55, 6771–6784.

77.     “An Artificial Photosynthetic Antenna-Reaction Center Complex,” Kuciauskas, D.; Liddell, P. A.; Lin, S.; Johnson, T. E.; Weghorn, S. J.; Lindsey, J. S.; Moore, A. L.; Moore, T. A.; Gust, D. J. Am. Chem. Soc. 1999, 121, 8604–8614.

78.     “Effects of Metalation State (Free base, Mg, Zn, Cd) on Excited-State Energy Transfer in Diarylethyne-Linked Porphyrin Dimers,” Hascoat, P.; Yang, S. I.; Lammi, R. K.; Alley, J.; Bocian, D. F.; Lindsey, J. S.; Holten, D. Inorg. Chem. 1999, 38, 4849–4853.

79.     “Template-Directed Synthesis, Excited-State Photodynamics, and Electronic Communication in a Hexameric Wheel of Porphyrins,” Li, J.; Ambroise, A.; Yang, S. I.; Diers, J. R.; Seth, J.; Wack, C. R.; Bocian, D. F.; Holten, D.; Lindsey, J. S. J. Am. Chem. Soc. 1999, 121, 8927–8940.

80.     “Investigation and Refinement of Palladium-Coupling Conditions for the Synthesis of Diarylethyne-Linked Multiporphyrin Arrays,” Wagner, R. W.; Ciringh, Y.; Clausen, C.; Lindsey, J. S. Chem. Mater. 1999, 11, 2974–2983.

81.     “Rational Synthesis of Trans-Substituted Porphyrin Building Blocks Containing One Sulfur or Oxygen Atom in Place of Nitrogen at a Designated Site,” Cho, W.-S.; Kim, H.-J.; Littler, B. J.; Miller, M. A.; Lee, C.-H.; Lindsey, J. S. J. Org. Chem. 1999, 64, 7890–7901.

82.     “Thiol-Derivatized Porphyrins for Attachment to Electroactive Surfaces,” Gryko, D. T.; Clausen, C.; Lindsey, J. S. J. Org. Chem. 1999, 64, 8635–8647.

83.     “Synthesis and Properties of Star-Shaped Multiporphyrin-Phthalocyanine Light-Harvesting Arrays,” Li, J.; Diers, J. R.; Seth, J.; Yang, S. I.; Bocian, D. F.; Holten, D.; Lindsey, J. S. J. Org. Chem. 1999, 64, 9090–9100.

84.     “Efficient Synthesis of Light-Harvesting Arrays Composed of Eight Porphyrins and One Phthalocyanine,” Li, J.; Lindsey, J. S. J. Org. Chem. 1999, 64, 9101–9108.

85.     “Synthesis and Excited-State Photodynamics of Phenylethyne-Linked Porphyrin-Phthalocyanine Dyads,” Yang, S. I.; Li, J.; Cho, H. S.; Kim, D.; Bocian, D. F.; Holten, D.; Lindsey, J. S. J. Mater. Chem. 2000, 10, 283–296.

86.     “An Efficient One-Flask Synthesis of N-Confused Tetraphenylporphyrin,” Geier, G. R., III; Haynes, D. M.; Lindsey, J. S. Org. Lett. 1999, 1, 1455–1458.

87.     “Efficient Synthesis of Monoacyl Dipyrromethanes and Their Use in the Preparation of Sterically Unhindered trans-Porphyrins,” Rao, P. D.; Littler, B. J.; Geier, G. R., III; Lindsey, J. S. J. Org. Chem. 2000, 65, 1084–1092.

88.     “Rational Synthesis of meso-Substituted Porphyrins Bearing One Nitrogen Heterocyclic Group,” Gryko, D.; Lindsey, J. S. J. Org. Chem. 2000, 65, 2249–2252.

89.     “Rational Synthesis of Meso-Substituted Chlorin Building Blocks,” Strachan, J.-P.; O’Shea, D. F.; Balasubramanian, T.; Lindsey, J. S. J. Org. Chem. 2000, 65, 3160–3172.  Additions and Corrections: Strachan, J.-P.; O’Shea, D. F.; Balasubramanian, T.; Lindsey, J. S. J. Org. Chem. 2001, 66, 642.

90.     “Molecular Approach Toward Information Storage Based on the Redox Properties of Porphyrins in Self-Assembled Monolayers,” Roth, K. M.; Dontha, N.; Dabke, R. B.; Gryko, D. T.; Clausen, C.; Lindsey, J. S.; Bocian, D. F.; Kuhr, W. G. J. Vac. Sci. Technol. B. 2000, 18, 2359–2364.

91.     “Structural Control of Photoinduced Energy Transfer Between Adjacent and Distant Sites in Multiporphyrin Arrays,” Lammi, R. K.; Ambroise, A.; Balasubramanian, T.; Wagner, R. W.; Bocian, D. F.; Holten, D.; Lindsey, J. S. J. Am. Chem. Soc. 2000, 122, 7579–7591.

92.     “A Tightly Coupled Linear Array of Perylene, Bis(Porphyrin), and Phthalocyanine Units that Functions as a Photoinduced Energy-Transfer Cascade,” Miller, M. A.; Lammi, R. K.; Prathapan, S.; Holten, D.; Lindsey, J. S. J. Org. Chem. 2000, 65, 6634–6649.

93.     “Rational Syntheses of Porphyrins Bearing up to Four Different Meso Substituents,” Rao, P. D.; Dhanalekshmi, S.; Littler, B. J.; Lindsey, J. S. J. Org. Chem. 2000, 65, 7323–7344.

Cover feature for the issue containing papers 94-98:

94.     “Synthesis of “Porphyrin-Linker-Thiol” Molecules with Diverse Linkers for Studies of Molecular-Based Information Storage,” Gryko, D. T.; Clausen, C.; Roth, K. M.; Dontha, N.; Bocian, D. F.; Kuhr, W. G.; Lindsey, J. S. J. Org. Chem. 2000, 65, 7345–7355.

95.     “Synthesis of Thiol-Derivatized Ferrocene-Porphyrins for Studies of Multibit Information Storage,” Gryko, D. T.; Zhao, F.; Yasseri, A. A.; Roth, K. M.; Bocian, D. F.; Kuhr, W. G.; Lindsey, J. S. J. Org. Chem. 2000, 65, 7356–7362.

96.     “Synthesis of Thiol-Derivatized Porphyrin Dimers and Trimers for Studies of Architectural Effects on Multibit Information Storage,” Clausen, C.; Gryko, D. T.; Dabke, R. B.; Dontha, N.; Bocian, D. F.; Kuhr, W. G.; Lindsey, J. S. J. Org. Chem. 2000, 65, 7363–7370.

97.     “Investigation of Tightly Coupled Porphyrin Arrays Comprised of Identical Monomers for Multibit Information Storage,” Clausen, C.; Gryko, D. T.; Yasseri, A. A.; Diers, J. R.; Bocian, D. F.; Kuhr, W. G.; Lindsey, J. S. J. Org. Chem. 2000, 65, 7371–7378.

98.     “Synthesis of Thiol-Derivatized Europium Porphyrinic Triple-Decker Sandwich Complexes for Multibit Molecular Information Storage,” Li, J.; Gryko, D.; Dabke, R. B.; Diers, J. R.; Bocian, D. F.; Kuhr, W. G.; Lindsey, J. S. J. Org. Chem. 2000, 65, 7379–7390.

99.     “A Survey of Acid Catalysts for Use in Two-Step, One-Flask Syntheses of Meso-Substituted Porphyrinic Macrocycles,” Geier, G. R., III; Ciringh, Y.; Li, F.; Haynes, D. M.; Lindsey, J. S. Org. Lett. 2000, 2, 1745–1748.

100.    “A Self-Assembled Light-Harvesting Array of Seven Porphyrins in a Wheel and Spoke Architecture,” Ambroise, A.; Li, J.; Yu, L.; Lindsey, J. S. Org. Lett. 2000, 2, 2563–2566.

101.    “Rational Synthesis of b-Substituted Chlorin Building Blocks,” Balasubramanian, T.; Strachan, J.-P.; Boyle, P. D.; Lindsey, J. S. J. Org. Chem. 2000, 65, 7919–7929.

102.    “Mechanisms of Excited-State Energy-Transfer Gating in Linear versus Branched Multiporphyrin Arrays,” Lammi, R. K.; Wagner, R. W.; Ambroise, A.; Diers, J. R.; Bocian, D. F.; Holten, D.; Lindsey, J. S. J. Phys. Chem. B 2001, 105, 5341–5352.

103.    “Design and Synthesis of Porphyrin-Based Optoelectronic Gates,” Ambroise, A.; Wagner, R. W.; Rao, P. D.; Riggs, J. A.; Hascoat, P.; Diers, J. R.; Seth, J.; Lammi, R. K.; Bocian, D. F.; Holten, D.; Lindsey, J. S. Chem. Mater. 2001, 13, 1023–1034.

104.    “Studies Related to the Design and Synthesis of a Molecular Octal Counter,” Gryko, D.; Li, J.; Diers, J. R.; Roth, K. M.; Bocian, D. F.; Kuhr, W. G.; Lindsey, J. S. J. Mater. Chem. 2001, 11, 1162–1180.

105.    “Investigation of Porphyrin-Forming Reactions.  Part 1. Pyrrole + Aldehyde Oligomerization in Two-Step, One-Flask Syntheses of meso-Substituted Porphyrins,” Geier, G. R., III; Lindsey, J. S. J. Chem. Soc., Perkin Trans. 2 2001, 677–686.

106.    “Investigation of Porphyrin-Forming Reactions.  Part 2. Examination of the Reaction Course in Two-Step, One-Flask Syntheses of meso-Substituted Porphyrins,” Geier, G. R., III; Lindsey, J. S. J. Chem. Soc., Perkin Trans. 2 2001, 687–700.

107.    “Investigation of Porphyrin-Forming Reactions.  Part 3. The Origin of Scrambling in Dipyrromethane + Aldehyde Condensations Yielding trans-A2B2-Tetraarylporphyrins,” Geier, G. R., III; Littler, B. J.; Lindsey, J. S. J. Chem. Soc., Perkin Trans. 2 2001, 701–711.

108.    “Investigation of Porphyrin-Forming Reactions.  Part 4. Examination of the Reaction Course in Syntheses of Porphyrins Via Dipyrromethanecarbinols,” Geier, G. R., III; Littler, B. J.; Lindsey, J. S. J. Chem. Soc., Perkin Trans. 2 2001, 712–718.

109.    “An Experiment Planner for Performing Successive Focused Grid Searches with an Automated Chemistry Workstation,” Dixon, J. M.; Du, H.; Cork, D. G.; Lindsey, J. S. Chemom. Intell. Lab. Syst. 2002, 62, 115–128.

110.    “A Parallel Simplex Search Method for Use with an Automated Chemistry Workstation,” Matsumoto, T.; Du, H.; Lindsey, J. S. Chemom. Intell. Lab. Syst. 2002, 62, 129–147.

111.    “A Two-tiered Strategy for Simplex and Multidirectional Optimization of Reactions with an Automated Chemistry Workstation,” Matsumoto, T.; Du, H.; Lindsey, J. S. Chemom. Intell. Lab. Syst. 2002, 62, 149–158.

112.    “An Approach for Parallel and Adaptive Screening of Discrete Compounds Followed by Optimization Using an Automated Chemistry Workstation,” Du, H.; Lindsey, J. S. Chemom. Intell. Lab. Syst. 2002, 62, 159–170.

113.    “Synthesis and Excited-State Photodynamics of Perylene-Porphyrin Dyads. 1. Parallel Energy and Charge Transfer via a Diphenylethyne Linker,” Prathapan, S.; Yang, S. I.; Seth, J.; Miller, M. A.; Bocian, D. F.; Holten, D.; Lindsey, J. S. J. Phys. Chem. B 2001, 105, 8237–8248.

114.    “Synthesis and Excited-State Photodynamics in Perylene-Porphyrin Dyads 2. Effects of Porphyrin Metalation State on the Energy-Transfer, Charge-Transfer, and Deactivation Channels,” Yang, S. I.; Prathapan, S.; Miller, M. A.; Seth, J.; Bocian, D. F.; Lindsey, J. S.; Holten, D. J. Phys. Chem. B 2001, 105, 8249–8258.

115.    “Investigation of Rational Syntheses of Heteroleptic Porphyrinic Lanthanide (Europium, Cerium) Triple-Decker Sandwich Complexes,” Gross, T.; Chevalier, F.; Lindsey, J. S. Inorg. Chem. 2001, 40, 4762–4774.

116.    “Quenching of Porphyrin Excited States by Adjacent or Distant Porphyrin Cation Radicals in Molecular Arrays,” Lammi, R. K.; Ambroise, A.; Wagner, R. W.; Diers, J. R.; Bocian, D. F.; Holten, D.; Lindsey, J. S. Chem. Phys. Lett. 2001, 341, 35–44.

117.    “Investigation of Acid Cocatalysis in Syntheses of Tetraphenylporphyrin,” Geier, G. R., III; Riggs, J. A.; Lindsey, J. S. J. Porphyrins Phthalocyanines 2001, 5, 681–690.

118.    “Synthesis and Excited-State Photodynamics of Perylene–Porphyrin Dyads Part 3. Effects of Perylene, Linker, and Connectivity on Ultrafast Energy Transfer,” Yang, S. I.; Lammi, R. K.; Prathapan, S.; Miller, M. A.; Seth, J.; Diers, J. R.; Bocian, D. F.; Lindsey, J. S.; Holten, D. J. Mater. Chem. 2001, 11, 2420–2430.

119.    “A Survey of Acid Catalysts in Dipyrromethanecarbinol Condensations Leading to meso-Substituted Porphyrins,” Geier, G. R., III; Callinan, J. B.; Rao, P. D.; Lindsey, J. S. J. Porphyrins Phthalocyanines 2001, 5, 810–823.

120.    “Synthesis of meso-Substituted Chlorins via Tetrahydrobilene-a Intermediates,” Taniguchi, M.; Ra, D.; Mo, G.; Balasubramanian, T.; Lindsey, J. S. J. Org. Chem. 2001, 66, 7342–7354.

121.    “Efficient Energy Transfer and Electron Transfer in an Artificial Photosynthetic Antenna-Reaction Center Complex,” Kodis, G.; Liddell, P. A.; de la Garza, L.; Clausen, P. C.; Lindsey, J. S.; Moore, A. L.; Moore, T. A.; Gust, D. J. Phys. Chem. A 2002, 106, 2036–2048.

122.    “Synthesis and Properties of Weakly Coupled Dendrimeric Multiporphyrin Light-Harvesting Arrays and Hole-Storage Reservoirs,” del Rosario Benites, M.; Johnson, T. E.; Weghorn, S.; Yu, L.; Rao, P. D.; Diers, J. R.; Yang, S. I.; Kirmaier, C.; Bocian, D. F.; Holten, D.; Lindsey, J. S. J. Mater. Chem. 2002, 12, 65–80.

123.    “Probing Electronic Communication in Covalently Linked Multiporphyrin Arrays.  A Guide to the Rational Design of Molecular Photonic Devices,” Holten, D.; Bocian, D. F.; Lindsey, J. S. Acc. Chem. Res. 2002, 35, 57–69.

124.    “Rational Syntheses of Cyclic Hexameric Porphyrin Arrays for Studies of Self-Assembling Light-Harvesting Systems,” Yu, L.; Lindsey, J. S. J. Org. Chem. 2001, 66, 7402–7419.

125.    “Investigation of Two Rational Routes for Preparing p-Phenylene-linked Porphyrin Trimers,” Yu, L.; Lindsey, J. S. Tetrahedron 2001, 57, 9285–9298.

126.    “Design and Synthesis of Light-Harvesting Rods for Intrinsic Rectification of the Migration of Excited-State Energy and Ground-State Holes,” Loewe, R. S.; Lammi, R. K.; Diers, J. R.; Kirmaier, C.; Bocian, D. F.; Holten, D.; Lindsey, J. S. J. Mater. Chem. 2002, 12, 1530–1552.

127.    “Design, Synthesis, and Characterization of Prototypical Multistate Counters in Three Distinct Architectures,” Schweikart, K.-H.; Malinovskii, V. L.; Diers, J. R.; Yasseri, A. A.; Bocian, D. F.; Kuhr, W. G.; Lindsey, J. S. J. Mater. Chem. 2002, 12, 808–828.

128.    “Glaser-Mediated Synthesis and Photophysical Characterization of Diphenylbutadiyne-Linked Porphyrin Dyads,” Youngblood, W. J.; Gryko, D. T.; Lammi, R. K.; Bocian, D. F.; Holten, D.; Lindsey, J. S. J. Org. Chem. 2002, 67, 2111–2117.

129.    “Effects of Diverse Acid Catalysts on the Reaction Course in the Two-Step One-Flask Synthesis of meso-Tetraphenylporphyrin,” Geier, G. R., III; Lindsey, J. S. J. Porphyrins Phthalocyanines 2002, 6, 159–185.

130.    “Weakly Coupled Molecular Photonic Wires: Synthesis and Excited-State Energy-Transfer Dynamics,” Ambroise, A.; Kirmaier, C.; Wagner, R. W.; Loewe, R. S.; Bocian, D. F.; Holten, D.; Lindsey, J. S. J. Org. Chem. 2002, 67, 3811–3826.

131.    “Characterization of Charge Storage in Redox-Active Self-Assembled Monolayers,” Roth, K. M.; Lindsey, J. S.; Bocian, D. F.; Kuhr, W. G. Langmuir 2002, 18, 4030–4040.

132.    “Capacitance and Conductance Characterization of Self-Assembled Ferrocene Monolayers on Silicon Surfaces for Memory Applications,” Li, Q.; Mathur, G.; Homsi, M.; Surthi, S.; Misra, V.; Malinovskii, V.; Schweikart, K.-H.; Yu, L.; Lindsey, J. S.; Liu, Z.; Dabke, R. B.; Yasseri, A.; Bocian, D. F.; Kuhr, W. G. Appl. Phys. Lett. 2002, 81, 1494–1496.  Reprinted in Virtual J. Nanoscale Sci. Technol. August 19, 2002, 6(8).

133.    “Synthesis and Excited-State Photodynamics in Perylene-Porphyrin Dyads. 4. Ultrafast Charge Separation and Charge Recombination Between Tightly Coupled Units in Polar Media,” Kirmaier, C.; Yang, S. I.; Prathapan, S.; Miller, M. A.; Diers, J. R.; Bocian, D. F.; Lindsey, J. S.; Holten, D. Res. Chem. Intermed. 2002, 28, 719–740.

134.    “Acidolysis of Intermediates Used in the Preparation of Core-Modified Porphyrinic Macrocycles,” Chevalier, F.; Geier, G. R., III; Lindsey, J. S. J. Porphyrins Phthalocyanines 2002, 6, 186–197.

135.    “Comparison of Electron-Transfer and Charge-Retention Characteristics of Porphyrin-Containing Self-Assembled Monolayers Designed for Molecular Information Storage,” Roth, K. M.; Gryko, D. T.; Clausen, C.; Li, J.; Lindsey, J. S.; Kuhr, W. G.; Bocian, D. F. J. Phys. Chem. B 2002, 106, 8639–8648.

136.    “Synthesis and Photophysical Properties of Light-Harvesting Arrays Comprised of a Porphyrin Bearing Multiple Perylene-Monoimide Accessory Pigments,” Tomizaki, K.-Y.; Loewe, R. S.; Kirmaier, C.; Schwartz, J. K.; Retsek, J. L.; Bocian, D. F.; Holten, D.; Lindsey, J. S. J. Org. Chem. 2002, 67, 6519–6534.

137.    “Synthesis and Electronic Properties of Regioisomerically Pure Oxochlorins,” Taniguchi, M.; Kim, H.-J.; Ra, D.; Schwartz, J. K.; Kirmaier, C.; Hindin, E.; Diers, J. R.; Prathapan, S.; Bocian, D. F.; Holten, D.; Lindsey, J. S. J. Org. Chem. 2002, 67, 7329–7342.

138.    “Synthesis of Perylene–Porphyrin Building Blocks and Rod-Like Oligomers for Light-Harvesting Applications,” Loewe, R. S.; Tomizaki, K.-Y.; Youngblood, W. J.; Bo, Z.; Lindsey, J. S. J. Mater. Chem. 2002, 12, 3438–3451.

139.    “Synthesis of Perylene–Porphyrin Dyads for Light-Harvesting Studies,” Loewe, R. S.; Tomizaki, K.-Y.; Chevalier, F.; Lindsey, J. S. J. Porphyrins Phthalocyanines 2002, 6, 626–642.

140.    “Measurements of Electron-Transfer Rates of Charge-Storage Molecular Monolayers on Si(100).  Toward Hybrid Molecular/Semiconductor Information Storage Devices,” Roth, K. M.; Yasseri, A. A.; Liu, Z.; Dabke, R. B.; Malinovskii, V.; Schweikart, K.-H.; Yu, L.; Tiznado, H.; Zaera, F.; Lindsey, J. S.; Kuhr, W. G.; Bocian, D. F. J. Am. Chem. Soc. 2003, 125, 505–517.

141.    “Synthesis and Excited-State Photodynamics of A Perylene-Monoimide-Oxochlorin Dyad.  A Light-Harvesting Array,” Muthukumaran, K.; Loewe, R. S.; Kirmaier, C.; Hinden, E.; Schwartz, J. K.; Sazanovich, I. V.; Diers, J. R.; Bocian, D. F.; Holten, D.; Lindsey, J. S. J. Phys. Chem. B 2003, 107, 3431–3442.

142.    “Synthesis and Excited-State Photodynamics of Perylene-Bis(imide)-Oxochlorin Dyads. A Charge-Separation Motif,” Kirmaier, C.; Hinden, E.; Schwartz, J. K.; Sazanovich, I. V.; Diers, J. R.; Muthukumaran, K.; Taniguchi, M.; Bocian, D. F.; Lindsey, J. S.; Holten, D. J. Phys. Chem. B 2003, 107, 3443–3454.

143.    “Practical Synthesis of Perylene-Monoimide Building Blocks That Possess Features Appropriate for Use in Porphyrin-Based Light-Harvesting Arrays,” Tomizaki, K.-Y.; Thamyongkit, P.; Loewe, R. S.; Lindsey, J. S. Tetrahedron 2003, 59, 1191–1207.

144.    “Formation of Porphyrins in the Presence of Acid-Labile Metalloporphyrins. A New Route to Mixed-Metal Multiporphyrin Arrays,” Speckbacher, M.; Yu, L.; Lindsey, J. S. Inorg. Chem. 2003, 42, 4322–4337.

145.    “Electrical Characterization of Redox-Active Molecular Monolayers on SiO2 for Memory Applications,” Li, Q.; Surthi, S.; Mathur, G.; Gowda, S.; Sorenson, T. A.; Tenent, R. C.; Kuhr, W. G.; Tamaru, S.-I.; Lindsey, J. S.; Liu, Z.; Bocian, D. F.; Misra, V. Appl. Phys. Lett. 2003, 83, 198–200.

146.    “Comparison of Excited-State Energy Transfer in Arrays of Hydroporphyrins (Chlorins, Oxochlorins) Versus Porphyrins: Rates, Mechanisms, and Design Criteria,” Taniguchi, M.; Ra, D.; Kirmaier, C.; Hindin, E. K.; Schwartz, J. K.; Diers, J. R.; Knox, R. S.; Bocian, D. F.; Lindsey, J. S.; Holten, D. J. Am. Chem. Soc. 2003, 125, 13461–13470.

Cover feature for the issue containing papers 147 and 148:

147.    “Excited-State Energy-Transfer Dynamics of Self-Assembled Imine-Linked Porphyrin Dyads,” Sazanovich, I. V.; Balakumar, A.; Muthukumaran, K.; Hindin, E.; Kirmaier, C.; Diers, J. R.; Lindsey, J. S.; Bocian, D. F.; Holten, D. Inorg. Chem. 2003, 42, 6616–6628.

148.    “Excited-State Energy-Transfer Dynamics in Self-Assembled Triads Composed of Two Porphyrins and an Intervening Bis(dipyrrinato)metal Complex,” Yu, L.; Muthukumaran, K.; Sazanovich, I. V.; Kirmaier, C.; Hindin, E.; Diers, J. R.; Boyle, P. D.; Bocian, D. F.; Holten, D.; Lindsey, J. S. Inorg. Chem. 2003, 42, 6629–6647.

149.    “Synthesis of Cyclic Hexameric Porphyrin Arrays. Anchors for Surface Immobilization and Columnar Self-Assembly,” Tomizaki, K.-y.; Yu, L.; Wei, L.; Bocian, D. F.; Lindsey, J. S. J. Org. Chem. 2003, 68, 8199–8207.

150.    “A Scalable Synthesis of Meso-Substituted Dipyrromethanes,” Laha, J. K.; Dhanalekshmi, S.; Taniguchi, M.; Ambroise, A.; Lindsey, J. S. Org. Process Res. Dev. 2003, 7, 799–812.

151.    “Synthesis and Characterization of Bis(S-acetylthio)-Derivatized Europium Triple-Decker Monomers and Oligomers,” Schweikart, K.-H.; Malinovskii, V. L.; Yasseri, A. A.; Li, J.; Lysenko, A. B.; Bocian, D. F.; Lindsey, J. S. Inorg. Chem. 2003, 42, 7431–7446.

Cover feature for the issue containing papers 152-155:

152.    “Diverse Redox-Active Molecules Bearing O-, S-, or Se- Terminated Tethers for Attachment to Silicon in Studies of Molecular Information Storage,” Balakumar, A.; Lysenko, A. B.; Carcel, C.; Malinovskii, V. L.; Gryko, D. T.; Schweikart, K.-H.; Loewe, R. S.; Yasseri, A. A.; Liu, Z.; Bocian, D. F.; Lindsey, J. S. J. Org. Chem. 2004, 69, 1435–1443.

153.    “Porphyrins Bearing Arylphosphonic Acid Tethers for Attachment to Oxide Surfaces,” Muthukumaran, K.; Loewe, R. S.; Ambroise, A.; Tamaru, S.-I.; Li, Q.; Mathur, G.; Bocian, D. F.; Misra, V.; Lindsey, J. S. J. Org. Chem. 2004, 69, 1444–1452.

154.    “Porphyrins Bearing Mono or Tripodal Benzylphosphonic Acid Tethers for Attachment to Oxide Surfaces,” Loewe, R. S.; Ambroise, A.; Muthukumaran, K.; Padmaja, K.; Lysenko, A. B.; Mathur, G.; Li, Q.; Bocian, D. F.; Misra, V.; Lindsey, J. S. J. Org. Chem. 2004, 69, 1453–1460.

155.    “Diverse Redox-Active Molecules Bearing Identical Thiol-Terminated Tripodal Tethers for Studies of Molecular Information Storage,” Wei, L.; Padmaja, K.; Youngblood, W. J.; Lysenko, A. B.; Lindsey, J. S.; Bocian, D. F. J. Org. Chem. 2004, 69, 1461–1469.

156.    “Hybrid Silicon/Molecular Memories: Co-Engineering for Novel Functionality,” Gowda, S.; Mathur, G.; Li, Q.; Surthi, S.; Zhao, Q.; Lindsey, J. S.; Mobley, K.; Bocian, D. F.; Misra, V. IEDM Tech. Dig. 2003, 537–540.

157.    “Molecular Memories that Survive Silicon Device Processing and Real-World Operation,” Liu, Z.; Yasseri, A. A.; Lindsey, J. S.; Bocian, D. F. Science 2003, 302, 1543–1545.

158.    “Structural Control of the Excited-State Dynamics of Bis(dipyrrinato)zinc Complexes: Self-Assembling Chromophores for Light-Harvesting Architectures,” Sazanovich, I. V.; Kirmaier, C.; Hindin, E.; Yu, L.; Bocian, D. F.; Lindsey, J. S.; Holten, D. J. Am. Chem. Soc. 2004, 126, 2664–2665.

159.    “Multibit Memory Using Self-assembly of Mixed Ferrocene/Porphyrin Monolayers on Silicon,” Li, Q.; Mathur, G.; Gowda, S.; Surthi, S.; Zhao, Q.; Yu, L.; Lindsey, J. S.; Bocian, D. F.; Misra, V. Adv. Mater. 2004, 16, 133–137.

160.    “A Tin-Complexation Strategy for Use with Diverse Acylation Methods in the Preparation of 1,9-Diacyldipyrromethanes,” Tamaru, S.-I.; Yu, L.; Youngblood, W. J.; Muthukumaran, K.; Taniguchi, M.; Lindsey, J. S. J. Org. Chem. 2004, 69, 765–777.

161.    “Photophysical Properties of Phenylethyne-Linked Porphyrin and Oxochlorin Dyads,” Hindin, E.; Kirmaier, C.; Diers, J. R.; Tomizaki, K.-Y.; Taniguchi, M.; Lindsey, J. S.; Bocian, D. F.; Holten, D. J. Phys. Chem. B 2004, 108, 8190–8200.

162.    “Synthesis of Phenylethyne-linked Porphyrin Dyads,” Tomizaki, K.-Y.; Lysenko, A. B.; Taniguchi, M.; Lindsey, J. S. Tetrahedron 2004, 60, 2011–2023.

163.    “Swallowtail Porphyrins: Synthesis, Characterization and Incorporation into Porphyrin Dyads,” Thamyongkit, P.; Speckbacher, M.; Diers, J. R.; Kee, H. L.; Kirmaier, C.; Holten, D.; Bocian, D. F.; Lindsey, J. S. J. Org. Chem. 2004, 69, 3700–3710.

164.    “Porphyrin Architectures Tailored for Studies of Molecular Information Storage,” Carcel, C. M.; Laha, J. K.; Loewe, R. S.; Thamyongkit, P.; Schweikart, K.-H.; Misra, V.; Bocian, D. F.; Lindsey, J. S. J. Org. Chem. 2004, 69, 6739–6750.

165.    “A New Route to meso-Formyl Porphyrins,” Balakumar, A.; Muthukumaran, K.; Lindsey, J. S. J. Org. Chem. 2004, 69, 5112–5115.

166.    “Multiple-Bit Storage Properties of Porphyrin Monolayers on SiO2,” Li, Q.; Surthi, S.; Mathur, G.; Gowda, S.; Zhao, Q.; Sorenson, T. A.; Tenent, R. C.; Muthukumaran, K.; Lindsey, J. S.; Misra, V. Appl. Phys. Lett. 2004, 85, 1829–1831.

167.    “Effects of Aldehyde or Dipyrromethane Substituents on the Reaction Course Leading to meso-Substituted Porphyrins,” Geier, G. R., III; Lindsey, J. S. Tetrahedron 2004, 60, 11435–11444.

168.    “Excited-State Energy Flow in Covalently Linked Multiporphyrin Arrays: The Essential Contribution of Energy Transfer between Nonadjacent Chromophores,” Hindin, E.; Forties, R. A.; Loewe, R. S.; Ambroise, A.; Kirmaier, C.; Bocian, D. F.; Lindsey, J. S.; Holten, D.; Knox, R. S. J. Phys. Chem. B 2004, 108, 12821–12832.

169.    “Structural Characterization of Modular Supramolecular Architectures in Solution,” Tiede, D. M.; Zhang, R.; Chen, L. X.; Yu, L.; Lindsey, J. S. J. Am. Chem. Soc. 2004, 126, 14054–14062.

170.    “Synthesis of Porphyrins Bearing Hydrocarbon Tethers and Facile Covalent Attachment to Si(100),” Liu, Z.; Yasseri, A. A.; Loewe, R. S.; Lysenko, A. B.; Malinovskii, V. L.; Zhao, Q.; Surthi, S.; Li, Q.; Misra, V.; Lindsey, J. S.; Bocian, D. F. J. Org. Chem. 2004, 69, 5568–5577.

171.    “Synthesis of Swallowtail-Substituted Multiporphyrin Rods,” Thamyongkit, P.; Lindsey, J. S. J. Org. Chem. 2004, 69, 5796–5799.

172.    “Characterization of Self-Assembled Monolayers of Porphyrins Bearing Multiple Thiol-Derivatized Rigid-Rod Tethers,” Yasseri, A. A.; Syomin, D.; Malinovskii, V. L.; Loewe, R. S.; Lindsey, J. S.; Zaera, F.; Bocian, D. F. J. Am. Chem. Soc. 2004, 126, 11944–11953.

173.    “Boron-Complexation Strategy for Use with 1-Acyldipyrromethanes,” Muthukumaran, K.; Ptaszek, M.; Noll, B.; Scheidt, W. R.; Lindsey, J. S. J. Org. Chem. 2004, 69, 5354–5364.

174.    “An Experiment Planner for Parallel Multidirectional Searches Using an Automated Chemistry Workstation,” Dixon, J. M.; Lindsey, J. S. J. Assoc. Lab. Autom. 2004, 9, 355–363.

175.    “Performance of Search Algorithms in the Examination of Chemical Reaction Spaces Using an Automated Chemistry Workstation,” Dixon, J. M.; Lindsey, J. S. J. Assoc. Lab. Autom. 2004, 9, 364-374.

176.    “Modulation of Drain Current by Redox-Active Molecules Incorporated in Si MOSFETS,” Gowda, S.; Mathur, G.; Li, Q.; Surthi, S.; Zhao, Q.; Lindsey, J. S.; Bocian, D. F.; Misra, V. IEEE Tech. Dig. 2004, 707–710.

177.    “Structural and Electron-Transfer Characteristics of O-, S-, and Se-Tethered Porphyrin Monolayers on Si(100),” Yasseri, A. A.; Syomin, D.; Loewe, R. S.; Lindsey, J. S.; Zaera, F.; Bocian, D. F. J. Am. Chem. Soc. 2004, 126, 15603–15612.  Additions and Corrections (addition of Laha, J. K. as coauthor): J. Am. Chem. Soc. 2005, 127, 9308.

178.    “9-Acylation of 1-Acyldipyrromethanes Containing a Dialkylboron Mask for the a-Acylpyrrole Motif,” Zaidi, S. H. H.; Muthukumaran, K.; Tamaru, S.-I.; Lindsey, J. S. J. Org. Chem. 2004, 69, 8356–8365.

179.    “Introduction of a Third Meso Substituent into Diaryl Chlorins and Oxochlorins,” Taniguchi, M.; Kim, M. N.; Ra, D.; Lindsey, J. S. J. Org. Chem. 2005, 70, 275–285.

180.    “PhotochemCAD 2. A Refined Program with Accompanying Spectral Databases for Photochemical Calculations,” Dixon, J. M.; Taniguchi, M.; Lindsey, J. S. Photochem. Photobiol. 2005, 81, 212–213.

181.    “Structural and Electron-Transfer Characteristics of Carbon-Tethered Porphyrin Monolayers on Si(100),” Wei, L.; Syomin, D.; Loewe, R. S.; Lindsey, J. S.; Zaera, F.; Bocian, D. F. J. Phys. Chem. B 2005, 109, 6323–6330.

182.    “Synthesis and Film-Forming Properties of Ethynyl Porphyrins,” Liu, Z.; Schmidt, I.; Thamyongkit, P.; Loewe, R. S.; Syomin, D.; Diers, J. R.; Zhao, Q.; Misra, V.; Lindsey, J. S.; Bocian, D. F. Chem. Mater. 2005, 17, 3728–3742.

183.    “Direct Synthesis of Palladium Porphyrins from Acyldipyrromethanes,” Sharada, D. S.; Muresan, A. Z.; Muthukumaran, K.; Lindsey, J. S. J. Org. Chem. 2005, 70, 3500–3510.

184.    “De Novo Synthesis of Stable Tetrahydroporphyrinic Macrocycles: Bacteriochlorins and a Tetradehydrocorrin,” Kim, H.-J.; Lindsey, J. S. J. Org. Chem. 2005, 70, 5475–5486.

185.    “1,9-Bis(N,N-dimethylaminomethyl)dipyrromethanes in the Synthesis of Porphyrins Bearing One or Two Meso Substituents,” Fan, D.; Taniguchi, M.; Yao, Z.; Dhanalekshmi, S.; Lindsey, J. S. Tetrahedron 2005, 61, 10291–10302.

186.    “Solution STM Images of Porphyrins on HOPG Reveal that Subtle Differences in Molecular Structure Dramatically Alter Packing Geometry,” Zou, Z.-Q.; Wei, L.; Chen, F.; Liu, Z.; Thamyongkit, P.; Loewe, R. S.; Lindsey, J. S.; Mohideen, U.; Bocian, D. F. J. Porphyrins Phthalocyanines 2005, 9, 387–392.

187.    “Structural Control of the Photodynamics of Boron-Dipyrrin Complexes,” Kee, H. L.; Kirmaier, C.; Yu, L.; Thamyongkit, P.; Youngblood, W. J.; Calder, M. E.; Ramos, L.; Noll, B. C.; Bocian, D. F.; Scheidt, W. R.; Birge, R. R.; Lindsey, J. S.; Holten, D. J. Phys. Chem. B 2005, 109, 20433–20443.

188.    “Imine-Substituted Dipyrromethanes in the Synthesis of Porphyrins Bearing One or Two Meso Substituents,” Taniguchi, M.; Balakumar, A.; Fan, D.; McDowell, B. E.; Lindsey, J. S. J. Porphyrins Phthalocyanines 2005, 9, 554–574.

189.    “A Compact All-Carbon Tripodal Tether Affords High Coverage of Porphyrins on Silicon Surfaces,” Padmaja, K.; Wei, L.; Lindsey, J. S.; Bocian, D. F. J. Org. Chem. 2005, 70, 7972–7978.

190.    “Multistate Molecular Information Storage using S-Acetylthio-derivatized Dyads of Triple-Decker Sandwich Coordination Compounds,” Lysenko, A. B.; Malinovskii, V. L.; Kisari, P.; Wei, L.; Diers, J. R.; Bocian, D. F.; Lindsey, J. S. J. Porphyrins Phthalocyanines 2005, 9, 491–508.

191.    “Refined Synthesis of 2,3,4,5-Tetrahydro-1,3,3-trimethyldipyrrin, a Deceptively Simple Precursor to Hydroporphyrins,” Ptaszek, M.; Bhaumik, J.; Kim, H.-J.; Taniguchi, M.; Lindsey, J. S. Org. Process Res. Dev. 2005, 9, 651–659.

192.    “Adsorption Characteristics of Tripodal-Thiol-Functionalized Porphyrins on Gold,” Wei, L.; Tiznado, H.; Liu, G.; Padmaja, K.; Lindsey, J. S.; Zaera, F.; Bocian, D. F. J. Phys. Chem. B 2005, 109, 23963–23971.

193.    “Alkylthio Unit as an a-Pyrrole Protecting Group for use in Dipyrromethane Synthesis,” Thamyongkit, P.; Bhise, A. D.; Taniguchi, M.; Lindsey, J. S. J. Org. Chem. 2006, 71, 903–910.

194.    “Synthesis of Dipyrrin-Containing Architectures,” Muthukumaran, K.; Zaidi, S. H. H.; Yu, L.; Thamyongkit, P.; Calder, M. E.; Sharada, D. S.; Lindsey, J. S. J. Porphyrins Phthalocyanines 2005, 9, 745–759.

195.    “Investigation of Streamlined Syntheses of Porphyrins Bearing Distinct Meso Substituents,” Zaidi, S. H. H.; Fico, R. M., Jr.; Lindsey, J. S. Org. Process Res. Dev. 2006, 10, 118–134.

196.    “Porphyrin Dyads Bearing Carbon Tethers for Studies of High-Density Molecular Charge Storage on Silicon Surfaces,” Thamyongkit, P.; Yu, L.; Padmaja, K.; Jiao, J.; Bocian, D. F.; Lindsey, J. S. J. Org. Chem. 2006, 71, 1156–1171.

197.    “Bioconjugatable Porphyrins Bearing a Compact Swallowtail Motif for Water Solubility,” Borbas, K. E.; Mroz, P.; Hamblin, M. R.; Lindsey, J. S. Bioconjugate Chem. 2006, 17, 638–653.

198.    “Diverse Porphyrin Dimers as Candidates for High-Density Charge-Storage Molecules,” Lysenko, A. B.; Thamyongkit, P.; Schmidt, I.; Diers, J. R.; Bocian, D. F.; Lindsey, J. S. J. Porphyrins Phthalocyanines 2006, 10, 22–32.

199.    “Nearly Chromatography-Free Synthesis of the A3B-Porphyrin 5-(4-Hydroxymethylphenyl)-10,15,20-tri-p-tolylporphinatozinc(II),”Zaidi, S. H. H.; Loewe, R. S.; Clark, B. A.; Jacob, M. J.; Lindsey, J. S. Org. Process Res. Dev. 2006, 10, 304–314.

200.    “Investigation of Stepwise Covalent Synthesis on a Surface Yielding Porphyrin-Based Multicomponent Architectures,” Schmidt, I.; Jiao, J.; Thamyongkit, P.; Sharada, D. S.; Bocian, D. F.; Lindsey, J. S. J. Org. Chem. 2006, 71, 3033–3050.

201.    “Synthesis of 1-Formyldipyrromethanes,” Ptaszek, M.; McDowell, B. E.; Lindsey, J. S. J. Org. Chem. 2006, 71, 4328–4331.

202.    “Synthetic Chlorins Bearing Auxochromes at the 3- and 13-Positions,” Laha, J. K.; Muthiah, C.; Taniguchi, M.; McDowell, B. E.; Ptaszek, M.; Lindsey, J. S. J. Org. Chem. 2006, 71, 4092-4102. Additions and Corrections: Laha, J. K.; Muthiah, C.; Taniguchi, M.; McDowell, B. E.; Ptaszek, M.; Lindsey, J. S. J. Org. Chem. 2009, 74, 5122.

203.    “Stepwise Formation and Characterization of Covalently Linked Multiporphyrin-Imide Architectures on Si(100),” Jiao, J.; Anariba, F.; Tiznado, H.; Schmidt, I.; Lindsey, J. S.; Zaera, F.; Bocian, D. F. J. Am. Chem. Soc. 2006, 128, 6965–6974.

204.    “Triple-Decker Sandwich Compounds Bearing Compact Triallyl Tripods for Molecular Information Storage Applications,” Padmaja, K.; Youngblood, W. J.; Wei, L.; Bocian, D. F.; Lindsey, J. S. Inorg. Chem. 2006, 45, 5479–5492.

205.    “A New Route for Installing the Isocyclic Ring in Chlorins Yielding 131-Oxophorbines,” Laha, J. K.; Muthiah, C.; Taniguchi, M.; Lindsey, J. S. J. Org. Chem. 2006, 71, 7049–7052.

206.    “Mechanisms, Pathways, and Dynamics of Excited-State Energy Flow in Self-Assembled Wheel-and-Spoke Light-Harvesting Architectures,” Song, H.-E.; Kirmaier, C.; Schwartz, J. K.; Hindin, E.; Yu, L.; Bocian, D. F.; Lindsey, J. S.; Holten, D. J. Phys. Chem. B 2006, 110, 19121–19130.

207.    “Effects of Multiple Pathways on Excited-State Energy Flow in Self-Assembled Wheel-and-Spoke Light-Harvesting Architectures,” Song, H.-E.; Kirmaier, C.; Schwartz, J. K.; Hindin, E.; Yu, L.; Bocian, D. F.; Lindsey, J. S.; Holten, D. J. Phys. Chem. B 2006, 110, 19131–19139.

208.    “Masked Imidazolyl-Dipyrromethanes in the Synthesis of Imidazole-Substituted Porphyrins,” Bhaumik, J.; Yao, Z.; Borbas, K. E.; Taniguchi, M.; Lindsey, J. S. J. Org. Chem. 2006, 71, 8807–8817.

209.    “Theoretical Solar-to-Electrical Energy-Conversion Efficiencies of Perylene-Porphyrin Light-Harvesting Arrays,” Hasselman, G. M.; Watson, D. F.; Stromberg, J. S.; Bocian, D. F.; Holten, D.; Lindsey, J. S.; Meyer, G. J. J. Phys. Chem. B 2006, 110, 25430–25440.

210.    “Synthesis of Hydrodipyrrins Tailored for Reactivity at the 1- and 9-Positions,” Kim, H.-J.; Dogutan, D. K.; Ptaszek, M.; Lindsey, J. S. Tetrahedron 2007, 63, 37–55.

211.    “Sparsely Substituted Chlorins as Core Constructs in Chlorophyll Analogue Chemistry. Part 1: Synthesis,” Ptaszek, M.; McDowell, B. E.; Taniguchi, M.; Kim, H.-J.; Lindsey, J. S. Tetrahedron 2007, 63, 3826–3839.

212.    “Sparsely Substituted Chlorins as Core Constructs in Chlorophyll Analogue Chemistry. Part 2: Derivatization,” Taniguchi, M.; Ptaszek, M.; McDowell, B. E.; Lindsey, J. S. Tetrahedron 2007, 63, 3840–3849.

213.    “Sparsely Substituted Chlorins as Core Constructs in Chlorophyll Analogue Chemistry. Part 3: Spectral and Structural Properties,” Taniguchi, M.; Ptaszek, M.; McDowell, B. E.; Boyle, P. D.; Lindsey, J. S. Tetrahedron 2007, 63, 3850–3863.

214.    “Effects of Substituents on Synthetic Analogs of Chlorophylls. Part 1: Synthesis, Vibrational Properties and Excited-State Decay Characteristics,” Kee, H. L.; Kirmaier, C.; Tang, Q.; Diers, J. R.; Muthiah, C.; Taniguchi, M.; Laha, J. K.; Ptaszek, M.; Lindsey, J. S.; Bocian, D. F.; Holten, D. Photochem. Photobiol. 2007, 83, 1110–1124.

215.    “Effects of Substituents on Synthetic Analogs of Chlorophylls. Part 2: Redox Properties, Optical Spectra and Electronic Structure,” Kee, H. L.; Kirmaier, C.; Tang, Q.; Diers, J. R.; Muthiah, C.; Taniguchi, M.; Laha, J. K.; Ptaszek, M.; Lindsey, J. S.; Bocian, D. F.; Holten, D. Photochem. Photobiol. 2007, 83, 1125–1143.

216.    “Direct Synthesis of Magnesium Porphine via 1-Formyldipyrromethane,” Dogutan, D. K.; Ptaszek, M.; Lindsey, J. S. J. Org. Chem. 2007, 72, 5008–5011.

217.    “Meso-13C-Labeled Porphyrins for Studies of Ground-State Hole Transfer in Multiporphyrin Arrays,” Thamyongkit, P.; Muresan, A. Z.; Diers, J. R.; Holten, D.; Bocian, D. F.; Lindsey, J. S. J. Org. Chem. 2007, 72, 5207–5217.

218.    “A Bipodal-Tethered Porphyrin for Attachment to Silicon Surfaces in Studies of Molecular Information Storage,” Schmidt, I.; Jiao, J.; Bocian, D. F.; Lindsey, J. S. J. Nanosci. Nanotechnol. 2008, 8, 4813-4817.

219.    “Regioselective 15-Bromination and Functionalization of a Stable Synthetic Bacteriochlorin,” Fan, D.; Taniguchi, M.; Lindsey, J. S. J. Org. Chem. 2007, 72, 5350–5357.

220.    “Rational Routes to Formyl-Substituted Chlorins,” Muthiah, C.; Bhaumik, J.; Lindsey, J. S. J. Org. Chem. 2007, 72, 5839–5842.

221.    “Tracking Electrons and Atoms in a Photoexcited Metalloporphyrin,” Chen, L. X.; Zhang, X.; Wasinger, E. C.; Attenkofer, K.; Jennings, G.; Muresan, A. Z.; Lindsey, J. S. J. Am. Chem. Soc. 2007, 129, 9616–9618.

222.    “Characterization of Porphyrin Surface Orientation in Monolayers on Au(111) and Si(100) Using Spectroscopically Labeled Molecules,” Jiao, J.; Thamyongkit, P.; Schmidt, I.; Lindsey, J. S.; Bocian, D. F. J. Phys. Chem. C 2007, 111, 12693–12704.

223.    “Design and Synthesis of Manganese Porphyrins with Tailored Lipophilicity: Investigation of Redox Properties and Superoxide Dismutase Activity,” Lahaye, D.; Muthukumaran, K.; Gryko, D.; Hung, C.-H.; Spasojevic, I.; Batinic-Haberle, I.; Lindsey, J. S. Bioorg. Med. Chem. 2007, 15, 7066–7086.

224.    “New Route to ABCD-porphyrins via Bilanes,” Dogutan, D. K.; Zaidi, S. H. H.; Thamyongkit, P.; Lindsey, J. S. J. Org. Chem. 2007, 72, 7701–7714.

225.    “Synthesis of Porphyrins Bearing 1-4 Hydroxymethyl Groups and Other One-carbon Oxygenic Substituents in Distinct Patterns,” Yao, Z.; Bhaumik, J.; Dhanalekshmi, S.; Ptaszek, M.; Rodriguez, P. A.; Lindsey, J. S. Tetrahedron 2007, 63, 10657–10670.

226.    “Synthesis and Photophysical Characterization of Porphyrin, Chlorin, and Bacteriochlorin Molecules Bearing Tethers for Surface Attachment,” Muthiah, C.; Taniguchi, M.; Kim, H.-J.; Schmidt, I.; Kee, H. L.; Holten, D.; Bocian, D. F.; Lindsey, J. S. Photochem. Photobiol. 2007, 83, 1513–1528.

227.    “Examination of Tethered Porphyrin, Chlorin, and Bacteriochlorin Molecules in Mesoporous Metal-Oxide Solar Cells,” Stromberg, J. R.; Marton, A.; Kee, H. L.; Kirmaier, C.; Diers, J. R.; Muthiah, C.; Taniguchi, M.; Lindsey, J. S.; Bocian, D. F.; Meyer, G. J.; Holten, D. J. Phys. Chem. C 2007, 15464–15478.

228.    “Ultrafast Stimulated Emission and Structural Dynamics in Nickel Porphyrins,” Zhang, X.; Wasinger, E. C.; Muresan, A. Z.; Attenkofer, K.; Jennings, G.; Lindsey, J. S.; Chen, L. X. J. Phys. Chem. A 2007, 111, 11736–11742.

229.    “Two Complementary Routes to 7-Substituted Chlorins.  Partial Mimics of Chlorophyll b,” Muthiah, C.; Ptaszek, M.; Nguyen, T. M.; Flack, K. M.; Lindsey, J. S. J. Org. Chem. 2007, 72, 7736–7749.

230.    “Synthesis and Structural Properties of Porphyrin Analogues of Bacteriochlorophyll c,” Ptaszek, M.; Yao, Z.; Dhanalekshmi, S.; Boyle, P. D.; Lindsey, J. S. Tetrahedron 2007, 63, 12629–12638.

231.    “Synthesis of Porphyrins for Metal Deposition Studies in Molecular Information Storage Applications,” Kulikov, O. V.; Schmidt, I.; Muresan, A. Z.; Lee, M. A.-P.; Bocian, D. F.; Lindsey, J. S. J. Porphyrins Phthalocyanines 2007, 11, 699–712.

232.    “Soluble Precipitable Porphyrins for Use in Targeted Molecular Brachytherapy,” Yao, Z.; Borbas, K. E.; Lindsey, J. S. New J. Chem. 2008, 32, 436–451.

233.    “A Compact Water-Soluble Porphyrin Bearing An Iodoacetamido Bioconjugatable Site,” Borbas, K. E.; Kee, H. L.; Holten, D.; Lindsey, J. S. Org. Biomol. Chem. 2008, 6, 187–194.

234.    “Synthesis and Excited-State Photodynamics of a Chlorin–Bacteriochlorin Dyad – Through-Space Versus Through-Bond Energy Transfer In Tetrapyrrole Arrays,” Muthiah, C.; Kee, H. L.; Diers, J. R.; Fan, D.; Ptaszek, M.; Bocian, D. F.; Holten, D.; Lindsey, J. S. Photochem. Photobiol. 2008, 84, 786–801.

Cover feature for issue containing paper 235:

235.    “Accessing the Near-Infrared Spectral Region with Stable, Synthetic, Wavelength-Tunable Bacteriochlorins,” Taniguchi, M.; Cramer, D. L.; Bhise, A. D.; Kee, H. L.; Bocian, D. F.; Holten, D.; Lindsey, J. S. New J. Chem. 2008, 32, 947–958.

236.    “Design, Synthesis, and Photophysical Properties of Water-Soluble Chlorins,” Borbas, K. E.; Chandrashaker, V.; Muthiah, C.; Kee, H. L.; Holten, D.; Lindsey, J. S. J. Org. Chem. 2008, 73, 3145–3158.

237.   “Effects of Counterion Mobility, Surface Morphology, and Charge Screening on the Electron-Transfer Rates of Porphyrin Monolayers,” Jiao, J.; Nordlund, E.; Lindsey, J. S.; Bocian, D. F. J. Phys. Chem. C 2008, 112, 6173–6180.

238.    “Metal–Molecule Interactions Upon Deposition of Copper Overlayers on Reactively Functionalized Porphyrin Monolayers on Si(100),” Anariba, F.; Schmidt, I.; Muresan, A. Z.; Lindsey, J. S.; Bocian, D. F. Langmuir 2008, 24, 6698–6704.

239.    “Swallowtail Bacteriochlorins. Lipophilic Absorbers for the Near-Infrared,” Borbas, K. E.; Ruzié, C.; Lindsey, J. S. Org. Lett. 2008, 10, 1931–1934.

240.    “Rational or Statistical Routes from 1-Acyldipyrromethanes to meso-Substituted Porphyrins. Distinct Patterns, Multiple Pyridyl Substituents, and Amphipathic Architectures,” Dogutan, D. K.; Ptaszek, M.; Lindsey, J. S. J. Org. Chem. 2008, 73, 6187–6201.

241.    “Comprehensive Characterization of Hybrid Junctions Comprised of a Porphyrin Monolayer Sandwiched Between a Coinage Metal Overlayer and a Si(100) Substrate,” Anariba, F.; Tiznado, H.; Diers, J. R.; Schmidt, I.; Muresan, A. Z.; Lindsey, J. S.; Zaera, F.; Bocian, D. F. J. Phys. Chem. C 2008, 112, 9474–9485.

242.    “Tailoring a Bacteriochlorin Building Block with Cationic, Amphipathic, or Lipophilic Substituents,” Ruzié, C.; Krayer, M.; Balasubramanian, T.; Lindsey, J. S. J. Org. Chem. 2008, 73, 5806–5820.

243.    “Examination of Chlorin–Bacteriochlorin Energy-Transfer Dyads as Prototypes for Near-Infrared Molecular Imaging Probes,” Kee, H. L.; Nothdurft, R.; Muthiah, C.; Diers, J. R.; Fan, D.; Ptaszek, M.; Bocian, D. F.; Lindsey, J. S.; Culver, J. P.; Holten, D. Photochem. Photobiol. 2008, 84, 1061–1072.

244.    “Investigation of the Scope of a New Route to ABCD-Bilanes and ABCD-Porphyrins,” Dogutan, D. K.; Lindsey, J. S. J. Org. Chem. 2008, 73, 6728–6742.

245.    “Photophysical Characterization of Imidazolium-Substituted Pd(II), In(III), and Zn(II) Porphyrins as Photosensitizers for Photodynamic Therapy,” Kee, H. L.; Bhaumik, J.; Diers, J. R.; Mroz, P.; Hamblin, M. R.; Bocian, D. F.; Lindsey, J. S.; Holten, D. J. Photochem. Photobiol. A: Chem. 2008, 200, 346-355.

246.    “Design and Synthesis of Water-Soluble Bioconjugatable trans-AB-Porphyrins,” Muresan, A. Z.; Lindsey, J. S. Tetrahedron 2008, 64, 11440-11448.

Selected as feature article (247):

247.    “Regiospecifically α-13C-Labeled Porphyrins for Studies of Ground-State Hole Transfer in Multiporphyrin Arrays,” Muresan, A, Z.; Thamyongkit, P.; Diers, J. R.; Holten, D.; Lindsey, J. S.; Bocian, D. F. J. Org. Chem. 2008, 73, 6947-6959.

248.    “Comparison of Electron-Transfer Rates for Metal- versus Ring-Centered Redox Processes of Porphyrins in Monolayers on Au(111),” Jiao, J.; Schmidt, I.; Taniguchi, M.; Lindsey, J. S.; Bocian, D. F. Langmuir 2008, 24, 12047-12053.

249.    “Energy- and Hole-Transfer Dynamics in Oxidized Porphyrin Dyads,” Song, H.-E.; Kirmaier, C.; Diers, J. R.; Lindsey, J. S.; Bocian, D. F.; Holten, D. J. Phys. Chem. B 2009, 113, 54-63.

250.    “Determination of Ground-State Hole-Transfer Rates Between Identical Sites in Oxidized Multiporphyrin Arrays Using Time-Resolved Optical Spectroscopy,” Song, H.-E.; Kirmaier, C.; Taniguchi, M.; Diers, J. R.; Bocian, D. F.; Lindsey, J. S.; Holten, D. J. Am. Chem. Soc. 2008, 130, 15636-15648.

251.    “Probing Ground-State Hole Transfer Between Equivalent, Electrochemically Inaccessible States in Multiporphyrin Arrays using Time-Resolved Optical Spectroscopy,” Song, H.-E.; Taniguchi, M.; Kirmaier, C.; Diers, J. R.; Bocian, D. F.; Lindsey, J. S.; Holten, D. Photochem. Photobiol. 2009, 85, 693-704.

252.    “Tandem Dispersion and Killing of Bacteria from a Biofilm,” Rogers, S. A.; Krayer, M.; Lindsey, J. S.; Melander, C. Org. Biomol. Chem. 2008, 7, 603-606.

253.    “Solution-State Conformational Ensemble of a Hexameric Porphyrin Array Characterized Using Molecular Dynamics and X-ray Scattering,” Mardis, K. L.; Sutton, H. M.; Zuo, X.; Lindsey, J. S.; Tiede, D. M. J. Phys. Chem. A 2009, 113, 2516-2523.

254.    “Chlorin-Bacteriochlorin Energy-transfer Dyads as Prototypes for Near-infrared Molecular Imaging Probes: Controlling Charge-transfer and Fluorescence Properties in Polar Media,” Kee, H. L.; Diers, J. R.; Ptaszek, M.; Muthiah, C.; Fan, D.; Lindsey, J. S.; Bocian, D. F.; Holten, D. Photochem. Photobiol. 2009, 85, 909-920.

255.    “Imidazole Metalloporphyrins as Photosensitizers for Photodynamic Therapy: Role of Molecular Charge, Central Metal and Hydroxyl Radical Production,” Mroz, P.; Bhaumik, J.; Dogutan, D. K.; Aly, Z.; Kamal, Z.; Khalid, L.; Kee, H. L.; Bocian, D. F.; Holten, D.; Lindsey, J. S.; Hamblin, M. R. Cancer Lett. 2009, 282, 63-76.

256.     “Simple Formation of an Abiotic Porphyrinogen in Aqueous Solution,” Lindsey, J. S.; Ptaszek, M.; Taniguchi, M. Orig. Life Evol. Biosph. 2009, 39, 495-515.

257.    “Fast and Robust Route to Hydroporphyrin–Chalcones with Extended Red or Near-Infrared Absorption,” Ruzié, C.; Krayer, M.; Lindsey, J. S. Org. Lett. 2009, 11, 1761–1764.259.  "Excited-State Energy Flow in Phenylene-Linked Multiporphyrin Arrays," Song, H.-E.; Taniguchi, M.; Speckbacher, M.; Yu, L.; Bocian, D. F.; Lindsey, J. S.; Holten, D. J. Phys. Chem. B 2009, 113, 8011-8019.

Selected as feature article and as cover art (258):

258.    “Regioselective Bromination Tactics in the De Novo Synthesis of Chlorophyll b Analogues,” Muthiah, C.; Lahaye, D.; Taniguchi, M.; Ptaszek, M.; Lindsey, J. S. J. Org. Chem. 2009, 74, 3237–3247.

259.    “Excited-State Energy Flow in Phenylene-Linked Multiporphyrin Arrays,” Song, H.-E.; Taniguchi, M.; Speckbacher, M.; Yu, L.; Bocian, D. F.; Lindsey, J. S.; Holten, D. J. Phys. Chem. B 2009, 113, 8011-8019.

260.    “Synthesis and Photochemical Properties of 12-Substituted versus 13-Substituted Chlorins,” Mass, O.; Ptaszek, M.; Taniguchi, M.; Diers, J. R.; Kee, H. L.; Bocian, D. F.; Holten, D.; Lindsey, J. S. J. Org. Chem. 2009, 74, 5276-5289.

261.    “Refined Syntheses of Hydrodipyrrin Precursors to Chlorin and Bacteriochlorin Building Blocks,” Krayer, M.; Balasubramanian, T.; Ruzié, C.; Ptaszek, M.; Cramer, D. L.; Taniguchi, M.; Lindsey, J. S. J. Porphyrins Phthalocyanines 2009, in press.

262.     “Synthetic Routes to Meso-Patterned Porphyrins,” Lindsey, J. S. Acc. Chem. Res. 2009, 42, in press.

263.    “Linker Dependence of Energy and Hole Transfer in Neutral and Oxidized Multiporphyrin Arrays,” Song, H.-E.; Taniguchi, M.; Diers, J. R.; Kirmaier, C.; Bocian, D. F.; Lindsey, J. S.; Holten, D. J. Phys. Chem. B 2009, in press.

Book chapters [top]

B1.     “Synthesis and Electron-Transfer Studies of Conjugated p-Electron Systems. Model Systems for Molecular Computation Studies,” Staley, S. W.; Eliasson, B.; Kearney, P. C.; Schreiman, I. C.; Lindsey, J. S. In "Molecular Electronic Devices,” 3rd Ed. Carter, F. L.; Siatkowski, R. E.; Wohltjen, H., Eds.; Elsevier (North Holland), 1988, 543–554.

B2.     “Synthetic Approaches Toward Molecular Devices,” Lindsey, J. S. In Molecular Electronics-Science and Technology, Aviram, A. Ed., Engineering Foundation (New York), 1989, 221–227.

B3.     “Design Concepts for Synthetic Chemistry Workstations,” Corkan, A.; Lindsey, J. S. In Advances in Laboratory Automation Robotics Vol. 6, Strimaitis, J. R.; Helfrich, J. P., Eds., Zymark Corp. (Hopkinton, MA), 1990, 477–497.

B4.     “Robotic Thin Layer Chromatography Instrument for Synthetic Chemistry,” Corkan, L. A.; Haynes, E.; Kline, S.; Lindsey, J. S. In New Trends in Radiopharmaceutical Synthesis, Quality Assurance, and Regulatory Control; Emran, A. M. Ed., Plenum Press: New York, 1991, 355–370.

B5.     “The Synthesis of Meso-Substituted Porphyrins,” Lindsey, J. S. In Metalloporphyrins Catalyzed Oxidations, Montanari, F.; Casella, L., Eds., Kluwer Academic Publishers: Dordrecht, The Netherlands, 1994, pp 49–86.

B6.     “Modular Design of Multi-Porphyrin Arrays for Studies in Photosynthesis and Molecular Photonics,” Lindsey, J. S. In Modular Chemistry, Michl, J. Ed., NATO ASI Series C: Mathematical and Physical Sciences, Vol. 499, Kluwer Academic Publishers: Dordrecht, 1997, pp. 517–528.

B7.     “Discussion of the Moore and Seeman Lectures,” Lindsey, J. S. In Modular Chemistry, Michl, J. Ed., NATO ASI Series C: Mathematical and Physical Sciences, Vol. 499, Kluwer Academic Publishers: Dordrecht, 1997, pp. 105–122.

B8.     “Automated Approaches Toward Reaction Optimization,” Lindsey, J. S. In A Practical Guide To Combinatorial Chemistry; Czarnik, A.; Hobbs-Dewitt, S., Eds.; American Chemical Society: Washington, DC, 1997, pp 309–326.

B9.     “An Automated Microscale Chemistry Workstation Capable of Parallel, Adaptive Experimentation,” Du, H.; Corkan, L. A.; Yang, K.; Kuo, P. Y.; Lindsey, J. S. In Laboratory Automation in the Chemical Industries; Cork, D. G.; Sugawara, T., Eds.; Marcel Dekker, Inc.: New York, 2002, pp 73–110. (a reprint of Chemom. Intell. Lab. Syst. 1999, 48, 181–203.)

B10.     “Synthesis of meso-Substituted Porphyrins,” Lindsey, J. S. In The Porphyrin Handbook; Kadish, K. M., Smith, K. M., Guilard, R., Eds.; Academic Press: San Diego, CA, 2000; Vol. 1, pp 45–118.

B11.     “Charge-Retention Characteristics of Self-Assembled Monolayers of “Molecular-Wire” Linked Porphyrins on Gold,” Roth, K. M.; Liu, Z.; Gryko, D. T.; Clausen, C.; Lindsey, J. S.; Bocian, D. F.; Kuhr, W. G. Molecules as Components of Electronic Devices; ACS Symposium Series 844; American Chemical Society: Washington, DC, 2003, pp 51–61.

Popular articles [top]

P1.     “Automated Workstations for Chemical Synthesis in Japan. A New Paradigm for Pharmaceutical Research,” Lindsey, J. S. Am. Lab. 1993 (March), 17, 18, 20.

Technical reports [top]

T1.     “Automated chemistry workstation operations guide and help manual,” Wagner, R. W.; Du, H.; Cork, D. G.; Yang, K.; Corkan, L. A.; Li, F.; Lindsey, J. S. North Carolina State University, Department of Chemistry, 1998, Technical Report TR98–1. 

T2.     “Automated chemistry workstation operations guide and help manual. Version 2,” Dixon, J. M.; Wagner, R. W.; Du, H.; Li, F.; Riggs-Sauthier, J. A.; Lindsey, J. S. North Carolina State University, Department of Chemistry, 2004, Technical Report TR04-1.

Extended abstracts [top]

A1.     “Configurational Effects on Hindered Diffusion in Micropores,” Anderson, J. L.; Kathawalla, I. A.; Lindsey, J. S. AIChE Symposium Series 266 “Diffusion and Convection in Porous Catalysts,” 1988, 84, 35–39.

A2.     “Robotic Empowerment of the Individual Chemist,” Lindsey, J. S.; Corkan, L. A. 9th Yuki Gousei Kagaku Kaki Daigaku (Proceedings of the 9th Organic Synthesis Summer School), 1991, pp 72–76 (held July 15-17, Toba, Mie Prefecture, Japan).

A3.     “Prospects for Automated Chemistry in the 21st Century.  Focus on Automated Approaches toward Reaction Optimization,” Lindsey, J. S. Kinki Kagaku Kyoukai, Gousei-bukai, 1st Robotto Gousei Kenkyu-kai) 1st Kinki Chemical Society Conference on Robotic Synthesis Research, 1997, pp 7-23 (held August 8, 1997, Osaka, Japan).

A4.     “Investigation of Matrices and Oxidants for LDI-TOF-MS of Magnesium Porphyrins,” Srinivasan, N.; Sanford, J. H. Jr.; Haney, C. A.; Lindsey, J. S. 45th Proceedings of the ASMS, 1997, 554.

A5.     “Some New Synthetic Methods in Porphyrin Chemistry,” Lindsey, J. S. (ICPP 3, New Orleans, LA, July 2005) J. Porphyrins Phthalocyanines 2004, 8, 435.

A6.      “Synthetic Routes to Stable, Tailorable Hydroporphyrins,” Kim, H.-J.; Laha, J. K.; McDowell, B. E.; Muthiah, C.; Ptaszek, M.; Taniguchi, M.; Fan, D.; Lindsey, J. S. (ICPP 4, Rome, Italy, July 2006) J. Porphyrins Phthalocyanines 2006, 10, 334.

A7.     “New Stable Synthetic Bacteriochlorins for Photodynamic Therapy of Melanoma,” Mroz, P.; Huang, Y.-Y.; Janjua, S.; Zhiyentayev, T.; Ruzié, C.; Borbas, K. E.; Fan, D.; Krayer, M.; Balasubramanian, T.; Yang, E. K.; Kee, H. L.; Holten, D.; Lindsey, J. S.; Hamblin, M. R. Proc. S.P.I.E. 7380 2009, 73802S-1-14.